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IDSAM23877_0654 TypeCDS
From627909 nt length1146
To629054 aa length381
Gene pI6.75
Definitionhypothetical protein M.W (Da) 41300
NoteEvidence 4 : Homologs of previously reported genes of unknown function AseI frg.
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_961 putative RNA polymerase ECF-subfamily sigma factor5770.0e+00
coelSCO4452 hypothetical protein5730.0e+00
sgrSGR_6932 putative RNA polymerase ECF-subfamily sigma factor5760.0e+00

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

Sigma70_r21Sigma-70 region 25-6833.52.4e-08

Sigma70_r4_21Sigma-70, region 498-14833.03.1e-08

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_053126567.1 RNA polymerase subunit sigma-24 [Streptomyces ambofaciens] >... 14700.0e+00
WP_063481144.1 RNA polymerase subunit sigma-24 [Streptomyces ambofaciens] >... 14560.0e+00
WP_030176129.1 MULTISPECIES: RNA polymerase sigma24 factor [Streptomyces] >... 13680.0e+00
WP_189191297.1 RNA polymerase subunit sigma-24 [Streptomyces albiflavescens... 13610.0e+00
WP_117667048.1 RNA polymerase subunit sigma-24 [Micromonospora sp. MW-13] 13570.0e+00
WP_086574335.1 MULTISPECIES: RNA polymerase subunit sigma-24 [Streptomyces]... 13570.0e+00
RGC69168.1 putative ECF RNA polymerase sigma factor SigI [Micromonospora sp.... 13520.0e+00
WP_053557422.1 RNA polymerase subunit sigma-24 [Streptomyces pristinaespira... 13510.0e+00
WP_200304155.1 RNA polymerase subunit sigma-24 [Streptomyces adelaidensis] 13480.0e+00
WP_067384329.1 RNA polymerase subunit sigma-24 [Streptomyces olivochromogen... 13480.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear