ID	SAM23877_0936	Type	CDS
From	922003	nt length	888
To	922890	aa length	295
Gene	sigF	pI	4.75
Definition	RNA polymerase sigma-F factor	M.W (Da)	32980
Note		AseI frg.
SignalP v.4.0	Non-secretory protein | plot	Category

Orthologs (if any)

Pfam search result

	Model	No.	Description	Position (aa)	Score	E-value
	Sigma70_r4	1	Sigma-70, region 4	237-286	64.9	3.1e-18
	Sigma70_r2	1	Sigma-70 region 2	68-137	60.2	1.1e-16
	Sigma70_r3	1	Sigma-70 region 3	147-207	54.6	7.7e-15
	Sigma70_r4_2	1	Sigma-70, region 4	237-283	37.0	1.8e-09
	KORA	1	TrfB plasmid transcriptional repressor	229-283	32.9	5.3e-08

BLAST search result (top 10 hits)

ID	Description	Score	E-value
WP_053127053.1	RNA polymerase sigma factor SigF [Streptomyces ambofaciens] ...	1413	0.0e+00
WP_189872637.1	RNA polymerase sigma factor SigF [Streptomyces viridiviolace...	1371	0.0e+00
WP_210960963.1	SigB/SigF/SigG family RNA polymerase sigma factor [Streptomy...	1360	0.0e+00
WP_055420366.1	RNA polymerase sigma factor SigF [Streptomyces pactum] >gb	1360	0.0e+00
WP_189233506.1	RNA polymerase sigma factor SigF [Streptomyces flaveolus] >d...	1358	0.0e+00
WP_100046425.1	RNA polymerase sigma factor SigF [Streptomyces sp. Alain-F2R...	1354	0.0e+00
WP_121750650.1	RNA polymerase sigma factor SigF [Streptomyces sp. E2N166]	1352	0.0e+00
WP_191887702.1	RNA polymerase sigma factor SigF [Streptomyces mutabilis] >d...	1351	0.0e+00
WP_225630489.1	MULTISPECIES: RNA polymerase sigma factor SigF [unclassified...	1350	0.0e+00
WP_043376137.1	RNA polymerase sigma factor SigF [Streptomyces mutabilis] >g...	1349	0.0e+00

PSORT result

Localization	Certainty	PSORT said
Not Clear

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