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IDSAM23877_1003 TypeCDS
From994444 nt length1056
To995499 aa length351
Gene pI9.86
Definitionputative ABC transporter permease M.W (Da) 35925
NoteEvidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology AseI frg.
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_7417 putative simple sugar ABC transporter permease protein4281.0e-151
coelSCO0810 putative ABC transporter permease.4331.0e-153

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2);

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

BPD_transp_21Branched-chain amino acid transport system / permease component58-323141.23e-41

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_053127160.1 ABC transporter permease [Streptomyces ambofaciens] >gb 13220.0e+00
WP_063481330.1 ABC transporter permease [Streptomyces ambofaciens] >gb 13190.0e+00
WP_055420093.1 ABC transporter permease [Streptomyces pactum] >gb 12363.1e-168
WP_121750878.1 ABC transporter permease [Streptomyces sp. E2N166] 12339.5e-168
WP_210961343.1 ABC transporter permease [Streptomyces sp. b94] >lcl 12302.2e-167
WP_005320677.1 ABC transporter permease [Streptomyces pristinaespiralis] >g... 12016.2e-163
WP_225631246.1 MULTISPECIES: ABC transporter permease [unclassified Strepto... 11902.6e-161
WP_188185466.1 ABC transporter permease [Streptomyces sp. TRM S81-3] >lcl 11903.4e-161
WP_189233628.1 ABC transporter permease [Streptomyces flaveolus] >dbj 11833.3e-160
WP_199551324.1 ABC transporter permease [Streptomyces sp. N35] 10704.4e-143

PSORT result

LocalizationCertaintyPSORT said
Not Clear