-- | --

IDSAM23877_1379 TypeCDS
From1405217 nt length441
To1405657 aa length146
Gene pI9.07
Definitionputative transcriptional regulatory protein M.W (Da) 16047
NoteEvidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology AseI frg.
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_7057 putative AsnC-family transcriptional regulator2686.0e-95
coelSCO1299 putative transcriptional regulatory protein2801.0e-99
sgrSGR_6251 putative AsnC-family transcriptional regulator2513.0e-88

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

HTH_AsnC-type1AsnC-type helix-turn-helix domain5-4560.77.6e-17

HTH_241Winged helix-turn-helix DNA-binding5-5157.75.6e-16

AsnC_trans_reg1Lrp/AsnC ligand binding domain77-13652.82.5e-14

MarR_21MarR family7-5034.61.2e-08

MarR1MarR family7-5133.23.2e-08

HTH_IclR1IclR helix-turn-helix domain11-5023.24e-05

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_053127739.1 Lrp/AsnC family transcriptional regulator [Streptomyces ambo... 7568.0e-102
AKZ54428.1 putative transcriptional regulatory protein [Streptomyces ambofac... 7559.3e-102
WP_063481504.1 Lrp/AsnC family transcriptional regulator [Streptomyces ambo... 7445.0e-100
WP_161329895.1 Lrp/AsnC family transcriptional regulator [Streptomyces sp. ... 7306.5e-98
WP_114526271.1 Lrp/AsnC family transcriptional regulator [Streptomyces parv... 7245.5e-97
WP_226485210.1 Lrp/AsnC family transcriptional regulator [Streptomyces parv... 7238.1e-97
WP_121750250.1 Lrp/AsnC family transcriptional regulator [Streptomyces sp. ... 7211.5e-96
WP_087810552.1 MULTISPECIES: Lrp/AsnC family transcriptional regulator [Str... 7211.9e-96
WP_122620962.1 MULTISPECIES: Lrp/AsnC family transcriptional regulator [unc... 7212.0e-96
WP_161343011.1 Lrp/AsnC family transcriptional regulator [Streptomyces sp. ... 7212.0e-96

PSORT result

LocalizationCertaintyPSORT said
Not Clear