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IDSAM23877_1567 TypeCDS
From1615097 nt length1806
To1613292 aa length601
GenesecD pI8.95
DefinitionProtein translocase subunit SecD M.W (Da) 61976
Note AseI frg.
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_6837 putative preprotein translocase SecD subunit8220.0e+00
coelSCO1516 secD protein-export membrane protein9980.0e+00
sgrSGR_6019 protein-export membrane protein SecD7130.0e+00

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

SecD_SecF1Protein export membrane protein383-55843.71.8e-11

MMPL1MMPL family403-56433.02.6e-08

Sec_GG1SecD/SecF GG Motif41-5820.40.00024

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_162492092.1 protein translocase subunit SecD [Streptomyces ambofaciens] ... 20480.0e+00
WP_219180013.1 protein translocase subunit SecD [Streptomyces sp. AC542_RSS... 20020.0e+00
WP_193776127.1 protein translocase subunit SecD [Streptomyces sp. E2N166] 19780.0e+00
WP_043375090.1 protein translocase subunit SecD [Streptomyces mutabilis] 19740.0e+00
WP_191887951.1 protein translocase subunit SecD [Streptomyces mutabilis] >d... 19740.0e+00
WP_210961474.1 protein translocase subunit SecD [Streptomyces sp. b94] >lcl... 19600.0e+00
WP_073730824.1 protein translocase subunit SecD [Streptomyces sp. CB02414] 19470.0e+00
ANB05353.1 preprotein translocase subunit SecD [Streptomyces ambofaciens] 19450.0e+00
WP_217254665.1 protein translocase subunit SecD [Streptomyces sp. AC602_WCS... 19390.0e+00
WP_220670381.1 protein translocase subunit SecD [Streptomyces geysiriensis]... 19370.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear