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IDSAM23877_1673 TypeCDS
From1723676 nt length570
To1723107 aa length189
Gene pI7.30
DefinitionRegulatory protein M.W (Da) 20952
Note AseI frg.
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_6718 putative regulatory protein2653.0e-92
coelSCO1619 putative regulatory protein3404.0e-122
sgrSGR_5892 putative transcriptional regulator2093.0e-70

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

HTH_311Helix-turn-helix domain11-7045.28.1e-12

HTH_31Helix-turn-helix16-6936.43.6e-09

Cupin_21Cupin domain116-17330.61.8e-07

Cupin_31Protein of unknown function (DUF861)119-16725.47.2e-06

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_053128263.1 helix-turn-helix domain-containing protein [Streptomyces amb... 7711.1e-102
WP_121746005.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 7622.8e-101
WP_031047783.1 MULTISPECIES: helix-turn-helix domain-containing protein [St... 7605.1e-101
WP_161381096.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 7552.4e-100
WP_030190837.1 MULTISPECIES: helix-turn-helix domain-containing protein [St... 7552.8e-100
WP_073730920.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 7543.7e-100
WP_164250458.1 helix-turn-helix domain-containing protein [Streptomyces coe... 7543.9e-100
WP_210961725.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 7535.1e-100
WP_054103187.1 MULTISPECIES: helix-turn-helix domain-containing protein [St... 7535.4e-100
WP_030404708.1 MULTISPECIES: helix-turn-helix domain-containing protein [St... 7535.4e-100

PSORT result

LocalizationCertaintyPSORT said
Not Clear