ID	SAM23877_2520	Type	CDS
From	2633828	nt length	1164
To	2632665	aa length	387
Gene	hrdA	pI	4.90
Definition	RNA polymerase principal sigma factor HrdA	M.W (Da)	42795
Note		AseI frg.
SignalP v.4.0	Non-secretory protein | plot	Category

Orthologs (if any)

Pfam search result

	Model	No.	Description	Position (aa)	Score	E-value
	Sigma70_r3	1	Sigma-70 region 3	233-309	92.5	1.1e-26
	Sigma70_r2	1	Sigma-70 region 2	154-223	83.3	6.6e-24
	Sigma70_r4	1	Sigma-70, region 4	322-375	72.6	1.2e-20
	Sigma70_r1_2	1	Sigma-70 factor, region 1.2	89-122	58.3	4.8e-16

BLAST search result (top 10 hits)

ID	Description	Score	E-value
WP_053130397.1	RNA polymerase sigma factor [Streptomyces ambofaciens] >gb	1475	0.0e+00
WP_107291951.1	RNA polymerase sigma factor [Streptomyces ambofaciens]	1451	0.0e+00
ANB06276.1	RNA polymerase subunit sigma-70 [Streptomyces ambofaciens]	1449	0.0e+00
WP_210901653.1	MULTISPECIES: RNA polymerase sigma factor [Streptomyces] >lc...	1376	0.0e+00
WP_219177325.1	sigma-70 family RNA polymerase sigma factor [Streptomyces sp...	1376	0.0e+00
WP_127444476.1	sigma-70 family RNA polymerase sigma factor [Streptomyces sp...	1375	0.0e+00
WP_031014637.1	MULTISPECIES: RNA polymerase sigma factor [Streptomyces] >gb...	1371	0.0e+00
WP_210962462.1	RNA polymerase sigma factor [Streptomyces sp. b94] >lcl	1368	0.0e+00
WP_107105092.1	sigma-70 family RNA polymerase sigma factor [Streptomyces sp...	1367	0.0e+00
WP_155058361.1	sigma-70 family RNA polymerase sigma factor [Streptomyces sp...	1366	0.0e+00

PSORT result

Localization	Certainty	PSORT said
Not Clear

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