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IDSAM23877_2610 TypeCDS
From2734549 nt length1002
To2733548 aa length333
Gene pI5.60
Definitionputative DNA-binding protein M.W (Da) 34872
NoteEvidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology AseI frg.
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_5558 putative DNA polymerase III delta subunit5650.0e+00
coelSCO2564 putative DNA-binding protein5990.0e+00
sgrSGR_4982 putative DNA-binding protein5220.0e+00

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

DNA_pol3_delta1DNA polymerase III, delta subunit20-18345.65.9e-12

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
AKZ55659.1 putative DNA-binding protein [Streptomyces ambofaciens ATCC 23877... 12696.7e-174
WP_179948842.1 DNA polymerase III subunit delta [Streptomyces ambofaciens] 12513.1e-171
OKI90702.1 hypothetical protein AMK11_03630 [Streptomyces sp. CB02414] 12481.3e-170
OMI88980.1 DNA polymerase III subunit delta [Streptomyces sp. M1013] 12471.4e-170
GHB98493.1 DNA-binding protein [Streptomyces anthocyanicus] 12471.5e-170
AIJ15888.1 DNA-binding protein [Streptomyces lividans TK24] >gb 12471.5e-170
EFD69328.1 DNA polymerase III, delta subunit [Streptomyces lividans TK24] >g... 12472.1e-170
AXL88573.1 DNA polymerase III subunit delta [Streptomyces sp. CB09001] 12437.9e-170
PVD10492.1 DNA polymerase III subunit delta [Streptomyces sp. CS207] >gb 12411.6e-169
GHA67059.1 DNA-binding protein [Streptomyces tendae] 12411.7e-169

PSORT result

LocalizationCertaintyPSORT said
Not Clear