ID	SAM23877_2689	Type	CDS
From	2827642	nt length	531
To	2827112	aa length	176
Gene		pI	10.87
Definition	RNA polymerase sigma factor	M.W (Da)	19478
Note		AseI frg.
SignalP v.4.0	Non-secretory protein | plot	Category

Orthologs (if any)

Pfam search result

	Model	No.	Description	Position (aa)	Score	E-value
	Sigma70_r4	1	Sigma-70, region 4	120-168	59.0	2.1e-16
	Sigma70_r4_2	1	Sigma-70, region 4	115-166	52.4	2.7e-14
	Sigma70_ECF	1	ECF sigma factor	63-165	26.1	6.4e-06
	Sigma70_r2	1	Sigma-70 region 2	38-87	22.9	4.8e-05

BLAST search result (top 10 hits)

ID	Description	Score	E-value
AKZ55738.1	RNA polymerase sigma factor [Streptomyces ambofaciens ATCC 23877]...	860	9.5e-117
WP_107291862.1	sigma-70 family RNA polymerase sigma factor [Streptomyces am...	855	6.7e-116
AQS72202.1	RNA polymerase subunit sigma-70 [Streptomyces pactum]	836	4.3e-113
WP_199832315.1	sigma-70 family RNA polymerase sigma factor [Streptomyces pa...	831	2.6e-112
WP_222514372.1	sigma-70 family RNA polymerase sigma factor [Streptomyces sp...	830	4.5e-112
WP_061444741.1	sigma-70 family RNA polymerase sigma factor [Streptomyces sp...	826	1.5e-111
WP_206328748.1	sigma-70 family RNA polymerase sigma factor [Streptomyces sp...	826	1.8e-111
WP_193776258.1	sigma-70 family RNA polymerase sigma factor [Streptomyces sp...	825	2.7e-111
WP_210962067.1	sigma-70 family RNA polymerase sigma factor [Streptomyces sp...	823	4.7e-111
NHI09633....		823	5.2e-111

PSORT result

Localization	Certainty	PSORT said
Not Clear

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