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IDSAM23877_2966 TypeCDS
From3131046 nt length537
To3131582 aa length178
Gene pI8.54
DefinitionTranscription regulator AsnC M.W (Da) 19097
Note AseI frg.
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_5148 putative AsnC-family transcriptional regulator2857.0e-101
coelSCO2928 putative asnC-family transcriptional regulator3013.0e-107
sgrSGR_4611 putative AsnC-family transcriptional regulator2762.0e-97

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

AsnC_trans_reg1Lrp/AsnC ligand binding domain76-14251.28e-14

HTH_241Winged helix-turn-helix DNA-binding8-5438.17.4e-10

HTH_AsnC-type1AsnC-type helix-turn-helix domain7-4835.94.4e-09

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_174532214.1 Lrp/AsnC family transcriptional regulator [Streptomyces ambo... 8245.6e-111
AKZ56015.1 Transcription regulator AsnC [Streptomyces ambofaciens ATCC 23877... 8227.2e-111
ANB06674.1 AsnC family transcriptional regulator [Streptomyces ambofaciens] 8184.5e-110
WP_201258902.1 Lrp/AsnC family transcriptional regulator [Streptomyces ambo... 8175.0e-110
MYS54523.1 winged helix-turn-helix transcriptional regulator [Streptomyces s... 7851.9e-105
WP_061444456.1 Lrp/AsnC family transcriptional regulator [Streptomyces sp. ... 7801.1e-104
WP_007450106.1 MULTISPECIES: Lrp/AsnC family transcriptional regulator [Str... 7782.1e-104
WP_115746406.1 Lrp/AsnC family transcriptional regulator [Streptomyces sp. ... 7763.9e-104
WP_102930146.1 MULTISPECIES: Lrp/AsnC family transcriptional regulator [Str... 7755.7e-104
NDZ70233.1 Lrp/AsnC family transcriptional regulator [Streptomyces sp. SID10... 7765.7e-104

PSORT result

LocalizationCertaintyPSORT said
Not Clear