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IDSAM23877_2968 TypeCDS
From3132229 nt length1251
To3133479 aa length416
GeneopuCA pI5.75
DefinitionGlycine betaine/carnitine/choline transport ATP-binding protein OpuCA M.W (Da) 45893
Note AseI frg.
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_5146 putative ABC transporter ATP-binding protein7280.0e+00
coelSCO2931 putative ABC transporter ATP-binding protein7830.0e+00
sgrSGR_4609 putative ABC transporter ATP-binding protein6970.0e+00

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

ABC_tran1ABC transporter32-177124.92.8e-36

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_053131773.1 betaine/proline/choline family ABC transporter ATP-binding p... 21160.0e+00
WP_121747229.1 betaine/proline/choline family ABC transporter ATP-binding p... 19990.0e+00
WP_059301579.1 MULTISPECIES: betaine/proline/choline family ABC transporter... 19940.0e+00
WP_043372489.1 betaine/proline/choline family ABC transporter ATP-binding p... 19930.0e+00
WP_121701176.1 MULTISPECIES: betaine/proline/choline family ABC transporter... 19920.0e+00
WP_100045664.1 betaine/proline/choline family ABC transporter ATP-binding p... 19900.0e+00
WP_219176635.1 betaine/proline/choline family ABC transporter ATP-binding p... 19900.0e+00
WP_127440888.1 MULTISPECIES: betaine/proline/choline family ABC transporter... 19890.0e+00
WP_037900190.1 MULTISPECIES: betaine/proline/choline family ABC transporter... 19830.0e+00
WP_125538527.1 MULTISPECIES: betaine/proline/choline family ABC transporter... 19830.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear