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IDSAM23877_2999 TypeCDS
From3171483 nt length972
To3170512 aa length323
Gene pI9.71
Definitionputative lysR-family transcriptional regulator M.W (Da) 35117
NoteEvidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology AseI frg.
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_5113 putative LysR-family transcriptional regulator4641.0e-166
coelSCO2964 putative lysR-family transcriptional regulator5700.0e+00
sgrSGR_4571 putative LysR-family transcriptional regulator4069.0e-144

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

HTH_11Bacterial regulatory helix-turn-helix protein, lysR family10-6872.71.5e-20

LysR_substrate1LysR substrate binding domain112-22348.27.5e-13

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_053131868.1 LysR family transcriptional regulator [Streptomyces ambofaci... 13600.0e+00
WP_195890524.1 LysR family transcriptional regulator [Streptomyces olivaceu... 12547.5e-172
WP_194277441.1 LysR family transcriptional regulator [Streptomyces olivaceu... 12512.1e-171
WP_224299049.1 LysR family transcriptional regulator [Streptomyces olivaceu... 12502.8e-171
WP_224300415.1 LysR family transcriptional regulator [Streptomyces olivaceu... 12493.7e-171
WP_224349008.1 LysR family transcriptional regulator [Streptomyces olivaceu... 12494.3e-171
WP_224292329.1 LysR family transcriptional regulator [Streptomyces olivaceu... 12477.0e-171
WP_161376699.1 MULTISPECIES: LysR family transcriptional regulator StgR [un... 12451.6e-170
WP_127894590.1 LysR family transcriptional regulator StgR [Streptomyces sp.... 12442.5e-170
WP_159328791.1 LysR family transcriptional regulator StgR [Streptomyces ten... 12432.6e-170

PSORT result

LocalizationCertaintyPSORT said
Not Clear