-- | --

IDSAM23877_3503 TypeCDS
From3724955 nt length876
To3724080 aa length291
Gene pI5.63
Definitionputative GntR-family transcriptional regulator M.W (Da) 33035
NoteEvidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology AseI frg.
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_4021 putative GntR-family transcriptional regulator4541.0e-163
coelSCO4190 putative GntR-family transcriptional regulator5670.0e+00

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2);

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

GntR1Bacterial regulatory proteins, gntR family18-7466.31.2e-18

HTH_411Helix-turn-helix domain35-7628.39.2e-07

HTH_241Winged helix-turn-helix DNA-binding42-7024.31.6e-05

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
AKZ56550.1 putative GntR-family transcriptional regulator [Streptomyces ambo... 15230.0e+00
WP_053133276.1 winged helix-turn-helix domain-containing protein [Streptomy... 14740.0e+00
RDD85373.1 GntR family transcriptional regulator [Streptomyces parvulus] 14740.0e+00
WP_063482395.1 winged helix-turn-helix domain-containing protein [Streptomy... 14710.0e+00
AQS68920.1 GntR family transcriptional regulator [Streptomyces pactum] 14650.0e+00
WP_202546094.1 MULTISPECIES: winged helix-turn-helix domain-containing prot... 14650.0e+00
RSN48852.1 GntR family transcriptional regulator [Streptomyces sp. WAC 04229... 14640.0e+00
OSC67560.1 GntR family transcriptional regulator [Streptomyces sp. 4F] >gb 14620.0e+00
WP_003974781.1 MULTISPECIES: winged helix-turn-helix domain-containing prot... 14610.0e+00
PAK27876.1 GntR family transcriptional regulator [Streptomyces sp. alain-838... 14590.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear