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IDSAM23877_3583 TypeCDS
From3815324 nt length2268
To3813057 aa length755
Gene pI9.52
DefinitionATP-dependent RNA helicase M.W (Da) 82649
Note AseI frg.
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_4123 putative ATP-dependent RNA helicase8540.0e+00
coelSCO4096 ATP-dependent RNA helicase9490.0e+00
sgrSGR_3892 putative ATP-dependent RNA helicase9280.0e+00

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

DEAD1DEAD/DEAH box helicase100-267150.73.2e-44

Helicase_C1Helicase conserved C-terminal domain312-41084.27.1e-24

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
AKZ56630.1 ATP-dependent RNA helicase [Streptomyces ambofaciens ATCC 23877] 25610.0e+00
GGL71497.1 hypothetical protein GCM10010095_65270 [Streptomyces anthocyanic... 23610.0e+00
WP_053133489.1 DEAD/DEAH box helicase [Streptomyces ambofaciens] 23500.0e+00
WP_063482434.1 DEAD/DEAH box helicase [Streptomyces ambofaciens] >gb 23480.0e+00
CQR63224.1 ATP-dependent RNA helicase rhlE [Streptomyces leeuwenhoekii] 23200.0e+00
WP_166662051.1 DEAD/DEAH box helicase [Streptomyces sp. BK208] >lcl 22880.0e+00
WP_198601746.1 DEAD/DEAH box helicase [Streptomyces sp. MH60] >gb 22820.0e+00
OWA07490.1 RNA helicase, partial [Streptomyces sp. CS113] 22800.0e+00
MZE72696.1 DEAD/DEAH box helicase [Streptomyces sp. SID5789] 22770.0e+00
22760.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear