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IDSAM23877_3588 TypeCDS
From3818834 nt length3978
To3822811 aa length1325
GenehrpA pI8.54
DefinitionATP-dependent helicase M.W (Da) 150450
NoteEvidence 2a : Function of homologous gene experimentally demonstrated in an other organism%3B Product type e : enzyme AseI frg.
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_4128 putative ATP-dependent helicase25060.0e+00
coelSCO4092 ATP-dependent helicase26120.0e+00
sgrSGR_3884 putative ATP-dependent helicase22440.0e+00

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

DUF34181Domain of unknown function (DUF3418)726-1321756.12.4e-227

HA21Helicase associated domain (HA2)468-55970.01.6e-19

OB_NTP_bind1Oligonucleotide/oligosaccharide-binding (OB)-fold621-71255.64.6e-15

Helicase_C1Helicase conserved C-terminal domain288-40545.28.9e-12

DEAD1DEAD/DEAH box helicase88-23426.34.7e-06

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_053133499.1 ATP-dependent RNA helicase HrpA [Streptomyces ambofaciens] >... 68010.0e+00
WP_063482436.1 ATP-dependent RNA helicase HrpA [Streptomyces ambofaciens] >... 67870.0e+00
WP_109029024.1 ATP-dependent RNA helicase HrpA [Streptomyces rubrogriseus] ... 66040.0e+00
WP_016326762.1 MULTISPECIES: ATP-dependent RNA helicase HrpA [Streptomyces]... 66040.0e+00
WP_210917529.1 MULTISPECIES: ATP-dependent RNA helicase HrpA [unclassified ... 66010.0e+00
WP_164459413.1 ATP-dependent RNA helicase HrpA [Streptomyces tendae] >gb 66000.0e+00
WP_189284851.1 ATP-dependent RNA helicase HrpA [Streptomyces anthocyanicus]... 65990.0e+00
WP_087808521.1 ATP-dependent RNA helicase HrpA [Streptomyces sp. CS113] >gb... 65960.0e+00
WP_011029425.1 MULTISPECIES: ATP-dependent RNA helicase HrpA [Streptomyces]... 65960.0e+00
WP_030872464.1 MULTISPECIES: ATP-dependent RNA helicase HrpA [Streptomyces]... 65950.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear