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IDSAM23877_3736 TypeCDS
From3978533 nt length906
To3979438 aa length301
GeneabaB pI6.57
DefinitionHTH-type transcriptional regulator AraB M.W (Da) 32247
Note AseI frg.
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_4274 putative LysR-family transcriptional regulator5040.0e+00
coelSCO3919 putative lysR-family transcriptional regulator5160.0e+00

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2);

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

LysR_substrate1LysR substrate binding domain91-29781.54.7e-23

HTH_11Bacterial regulatory helix-turn-helix protein, lysR family4-6177.07.2e-22

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_053133851.1 LysR family transcriptional regulator [Streptomyces ambofaci... 15300.0e+00
WP_063482493.1 LysR family transcriptional regulator [Streptomyces ambofaci... 15180.0e+00
WP_122616529.1 LysR family transcriptional regulator [Streptomyces sp. Tu 4... 13670.0e+00
WP_219178777.1 LysR family transcriptional regulator [Streptomyces sp. AC54... 13630.0e+00
WP_100045409.1 LysR family transcriptional regulator [Streptomyces sp. Alai... 13610.0e+00
WP_055422107.1 LysR family transcriptional regulator [Streptomyces pactum] ... 13610.0e+00
WP_217163144.1 LysR family transcriptional regulator [Streptomyces sp. AC51... 13560.0e+00
WP_125491317.1 LysR family transcriptional regulator [Streptomyces sp. WAC ... 13540.0e+00
MZE71613.1 LysR family transcriptional regulator [Streptomyces sp. SID5789] 13540.0e+00
PAK23487.1 LysR family transcriptional regulator [Streptomyces sp. alain-838... 13540.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear