ID	SAM23877_3765	Type	CDS
From	4010721	nt length	729
To	4011449	aa length	242
Gene		pI	8.27
Definition	putative RNA polymerase sigma factor	M.W (Da)	25819
Note	Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology	AseI frg.
SignalP v.4.0	Non-secretory protein | plot	Category

Orthologs (if any)

Pfam search result

	Model	No.	Description	Position (aa)	Score	E-value
	Sigma70_r2	1	Sigma-70 region 2	30-97	62.8	1.7e-17
	Sigma70_r4_2	1	Sigma-70, region 4	130-182	53.9	9.2e-15
	Sigma70_r4	1	Sigma-70, region 4	135-182	33.5	1.9e-08
	Sigma70_ECF	1	ECF sigma factor	14-181	27.7	1.9e-06

BLAST search result (top 10 hits)

ID	Description	Score	E-value
WP_053133927.1	RNA polymerase sigma factor SigM [Streptomyces ambofaciens] ...	1047	4.4e-143
WP_063482507.1	RNA polymerase sigma factor SigM [Streptomyces ambofaciens] ...	1029	2.7e-140
WP_030237395.1	RNA polymerase sigma factor SigM [Streptomyces sp. NRRL S-45...	945	1.4e-127
WP_030898194.1	MULTISPECIES: RNA polymerase sigma factor SigM [unclassified...	938	2.0e-126
PAK25345.1	RNA polymerase sigma factor SigM [Streptomyces sp. alain-838]	934	1.0e-125
MYS71248.1	RNA polymerase sigma factor SigM [Streptomyces sp. SID5926]	931	2.5e-125
WP_055422132.1	RNA polymerase sigma factor SigM [Streptomyces pactum] >gb	930	2.8e-125
WP_184909757.1	RNA polymerase sigma factor SigM [Streptomyces luteogriseus]...	930	2.9e-125
		930	3.0e-125
WP_125630057.1	RNA polymerase sigma factor SigM [Streptomyces sp. KPB2] >gb...	926	1.2e-124

PSORT result

Localization	Certainty	PSORT said
Not Clear

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