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IDSAM23877_3990 TypeCDS
From4246068 nt length873
To4246940 aa length290
Gene pI4.86
Definitionputative RNA polymerase sigma factor M.W (Da) 31171
NoteEvidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology AseI frg.
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
coelSCO3626 putative RNA polymerase sigma factor4462.0e-160

*coel, Streptomyces coelicolor A3(2);

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

Sigma70_r21Sigma-70 region 26-6847.97.9e-13

Sigma70_r4_21Sigma-70, region 4112-15829.83.1e-07

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_174532232.1 sigma-70 family RNA polymerase sigma factor [Streptomyces am... 11755.5e-161
WP_201258918.1 sigma-70 family RNA polymerase sigma factor [Streptomyces am... 11652.2e-159
ANB07592.1 RNA polymerase subunit sigma-70 [Streptomyces ambofaciens] 11643.7e-159
WP_193776429.1 sigma-70 family RNA polymerase sigma factor [Streptomyces sp... 10021.5e-134
WP_217168883.1 sigma-70 family RNA polymerase sigma factor [Streptomyces sp... 9923.1e-133
WP_055418725.1 sigma-70 family RNA polymerase sigma factor [Streptomyces pa... 9864.1e-132
WP_210963207.1 sigma-70 family RNA polymerase sigma factor [Streptomyces sp... 9855.3e-132
WP_191887320.1 sigma-70 family RNA polymerase sigma factor [Streptomyces mu... 9847.9e-132
WP_100045350.1 sigma-70 family RNA polymerase sigma factor [Streptomyces sp... 9812.2e-131
WP_043376829.1 sigma-70 family RNA polymerase sigma factor [Streptomyces mu... 9812.7e-131

PSORT result

LocalizationCertaintyPSORT said
Not Clear