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IDSAM23877_4123 TypeCDS
From4376380 nt length2856
To4379235 aa length951
GenetopA pI9.27
DefinitionDNA topoisomerase 1 M.W (Da) 103267
Note AseI frg.
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_4621 putative DNA topoisomerase I16420.0e+00
coelSCO3543 probable DNA topoisomerase I16710.0e+00
sgrSGR_3301 putative DNA topoisomerase I16290.0e+00

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

Topoisom_bac1DNA topoisomerase149-591438.62.1e-131

Toprim_C_rpt4Topoisomerase C-terminal repeat640-691, 699-763, 769-819, 832-884200.42.1e-60

Toprim1Toprim domain14-13497.54.1e-28

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_053134763.1 type I DNA topoisomerase [Streptomyces ambofaciens] >gb 42060.0e+00
WP_063482650.1 type I DNA topoisomerase [Streptomyces ambofaciens] >gb 42030.0e+00
WP_121748321.1 type I DNA topoisomerase [Streptomyces sp. E2N166] 41650.0e+00
WP_055418659.1 type I DNA topoisomerase [Streptomyces pactum] >gb 41590.0e+00
WP_210964042.1 type I DNA topoisomerase [Streptomyces sp. b94] >lcl 41520.0e+00
WP_217140738.1 type I DNA topoisomerase [Streptomyces sp. AC627_RSS907] 41510.0e+00
WP_219178359.1 type I DNA topoisomerase [Streptomyces sp. AC542_RSS864] 41430.0e+00
WP_122616819.1 type I DNA topoisomerase [Streptomyces sp. Tu 4128] 41400.0e+00
WP_215167294.1 type I DNA topoisomerase [Streptomyces sp. ISL-12] >lcl 41390.0e+00
WP_125774105.1 type I DNA topoisomerase [Streptomyces sp. WAC02707] >gb 41360.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear