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IDSAM23877_4148 TypeCDS
From4403098 nt length783
To4403880 aa length260
Gene pI10.60
Definitionputative ABC transporter transmembrane component M.W (Da) 27730
NoteEvidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology AseI frg.
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_4654 putative ABC transporter permease protein4065.0e-146
coelSCO3417 putative ABC transporter transmembrane component4712.0e-171
sgrSGR_4076 putative ABC transporter permease protein3151.0e-109

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

ABC2_membrane1ABC-2 type transporter17-22293.51.1e-26

ABC2_membrane_31ABC-2 family transporter protein59-25251.85.7e-14

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
AKZ57193.1 putative ABC transporter transmembrane component [Streptomyces am... 9872.5e-133
AXL89345.1 multidrug ABC transporter permease [Streptomyces sp. CB09001] 9258.2e-124
WP_122616935.1 ABC transporter permease [Streptomyces sp. Tu 4128] 9203.3e-123
WP_161326164.1 ABC transporter permease [Streptomyces sp. SID5789] >gb 9142.8e-122
RDD89509.1 ABC transporter permease [Streptomyces parvulus] 9143.7e-122
GGL72599.1 transport permease protein [Streptomyces anthocyanicus] 9126.4e-122
AIJ15080.1 ABC transporter [Streptomyces lividans TK24] >gb 9126.5e-122
GHA72022.1 transport permease protein [Streptomyces anthocyanicus] 9092.1e-121
PSK52259.1 Daunorubicin/doxorubicin resistance ABC transporter permease prot... 9073.5e-121
WP_162833579.1 ABC transporter permease [Streptomyces sp. CB09001] 9065.3e-121

PSORT result

LocalizationCertaintyPSORT said
Not Clear