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IDSAM23877_4222 TypeCDS
From4482169 nt length789
To4482957 aa length262
Gene pI7.51
Definitionputative integral membrane protein M.W (Da) 27772
NoteEvidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology AseI frg.
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_4723 putative ABC transporter permease protein4041.0e-144
coelSCO3338 putative integral membrane protein4154.0e-149
sgrSGR_4140 putative ABC transporter permease protein3652.0e-129

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

ABC2_membrane1ABC-2 type transporter27-223123.56.8e-36

ABC2_membrane_31ABC-2 family transporter protein65-25479.32.6e-22

ABC2_membrane_21ABC-2 family transporter protein70-25637.61.3e-09

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_053135000.1 ABC transporter permease [Streptomyces ambofaciens] >gb 9795.2e-132
WP_087807947.1 ABC transporter permease [Streptomyces sp. CS113] >gb 9482.9e-127
WP_148107587.1 ABC transporter permease, partial [Streptomyces sp. WAC 0422... 9446.3e-127
WP_122616890.1 ABC transporter permease, partial [Streptomyces sp. Tu 4128] 9436.9e-127
WP_161326307.1 ABC transporter permease [Streptomyces sp. SID5789] >gb 9437.8e-127
WP_016326517.1 MULTISPECIES: ABC transporter permease [Streptomyces] >gb 9412.9e-126
WP_055418573.1 ABC transporter permease [Streptomyces pactum] >gb 9403.8e-126
WP_046247946.1 ABC transporter permease, partial [Streptomyces sp. WM6391] ... 9383.8e-126
WP_011028918.1 MULTISPECIES: ABC transporter permease [Streptomyces] >lcl 9404.6e-126
WP_210978153.1 ABC transporter permease [Streptomyces sp. RM72] >lcl 9404.6e-126

PSORT result

LocalizationCertaintyPSORT said
Not Clear