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IDSAM23877_4231 TypeCDS
From4496008 nt length213
To4496220 aa length70
Gene pI9.05
DefinitionDNA-binding protein M.W (Da) 7783
Note AseI frg.
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_4731 hypothetical protein1381.0e-45
coelSCO3328 hypothetical protein1396.0e-46
sgrSGR_4146 conserved hypothetical protein1281.0e-41

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

HTH_171Helix-turn-helix domain14-6252.63.4e-14

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_051781202.1 MULTISPECIES: helix-turn-helix domain-containing protein [St... 3538.1e-43
ANB07757.1 transcriptional regulator [Streptomyces ambofaciens] >gb 3549.6e-43
QBJ91716.1 helix-turn-helix domain-containing protein [Streptomyces seoulens... 3531.3e-42
OSP35376.1 transcriptional regulator [Streptomyces sp. 13-12-16] >dbj 3504.0e-42
WP_004984898.1 MULTISPECIES: helix-turn-helix domain-containing protein [St... 3494.2e-42
KFG02535.1 transcriptional regulator [Streptomyces scabiei] >gb 3495.7e-42
AGS71012.1 DNA-binding protein [Streptomyces collinus Tu 365] >gb 3486.3e-42
QFZ74974.1 helix-turn-helix domain-containing protein [Streptomyces fagopyri... 3486.6e-42
AJE41859.1 transcriptional regulator [Streptomyces nodosus] >gb 3486.6e-42
EFF92373.1 excisionase/Xis, DNA-binding protein [Streptomyces sp. e14] 3488.4e-42

PSORT result

LocalizationCertaintyPSORT said
Not Clear