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IDSAM23877_4275 TypeCDS
From4542907 nt length204
To4542704 aa length67
GenecspD pI4.54
Definitioncold shock protein-like protein M.W (Da) 7145
NoteEvidence 2a : Function of homologous gene experimentally demonstrated in an other organism%3B PubMedId : 1622933%2C 21160192%2C 2186030%2C 9868784%3B Product type f : factor AseI frg.
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_4154 putative cold shock protein1322.0e-43

*avm, Streptomyces avermitilis;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

CSD1'Cold-shock' DNA-binding domain3-65101.61.4e-29

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_042169227.1 MULTISPECIES: cold-shock protein [Streptomyces] >gb 3441.6e-41
WP_028810498.1 MULTISPECIES: cold-shock protein [Streptomyces] >lcl 3414.6e-41
WP_191857668.1 cold-shock protein [Streptomyces fungicidicus] >gb 3406.8e-41
WP_004986771.1 MULTISPECIES: cold-shock protein [Streptomyces] >lcl 3407.0e-41
WP_037861485.1 MULTISPECIES: cold-shock protein [unclassified Streptomyces]... 3407.9e-41
WP_006136369.1 MULTISPECIES: cold-shock protein [Streptomyces] >gb 3399.4e-41
WP_205043802.1 MULTISPECIES: cold-shock protein [Streptomyces] >lcl 3399.6e-41
WP_190190300.1 cold-shock protein [Streptomyces minutiscleroticus] >dbj 3399.7e-41
WP_003973099.1 MULTISPECIES: cold-shock protein [Streptomyces] >gb 3399.9e-41
WP_210925114.1 cold-shock protein [Streptomyces sp. B93] >lcl 3391.2e-40

PSORT result

LocalizationCertaintyPSORT said
Not Clear