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IDSAM23877_4580 TypeCDS
From4840947 nt length897
To4841843 aa length298
Gene pI5.25
Definitionputative LysR-family transcriptional regulator M.W (Da) 30938
NoteEvidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology AseI frg.
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_4996 putative LysR-family transcriptional regulator4914.0e-178
coelSCO4766 putative transcriptional regulator5280.0e+00
sgrSGR_2761 putative LysR-family transcriptional regulator4478.0e-161

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

LysR_substrate1LysR substrate binding domain81-290139.96.5e-41

HTH_11Bacterial regulatory helix-turn-helix protein, lysR family2-5572.51.8e-20

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
AKZ57625.1 putative LysR-family transcriptional regulator [Streptomyces ambo... 13100.0e+00
WP_053135771.1 LysR family transcriptional regulator [Streptomyces ambofaci... 13043.6e-180
WP_030400269.1 MULTISPECIES: LysR family transcriptional regulator [Strepto... 12731.5e-175
WP_203715189.1 LysR family transcriptional regulator [Streptomyces diastati... 12711.9e-175
PPS79426.1 HTH-type transcriptional regulator GltC [Streptomyces sp. MH60] 12686.9e-175
GGY71237.1 LysR family transcriptional regulator [Streptomyces geysiriensis... 12687.8e-175
GGZ36992.1 LysR family transcriptional regulator [Streptomyces plicatus] 12652.0e-174
WP_029394254.1 MULTISPECIES: LysR family transcriptional regulator [Strepto... 12652.7e-174
WP_059300060.1 MULTISPECIES: LysR family transcriptional regulator [Strepto... 12653.1e-174
WP_104635745.1 LysR family transcriptional regulator [Streptomyces sp. MH60... 12643.8e-174

PSORT result

LocalizationCertaintyPSORT said
Not Clear