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IDSAM23877_4873 TypeCDS
From5162972 nt length924
To5162049 aa length307
Gene pI8.24
Definitionhypothetical protein M.W (Da) 33387
NoteEvidence 4 : Homologs of previously reported genes of unknown function AseI frg.
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_771 putative LysR-family transcriptional regulator3232.0e-111
coelSCO5096 LysR-family transcriptional regulatory protein5130.0e+00

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2);

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

LysR_substrate1LysR substrate binding domain92-303127.05.8e-37

HTH_11Bacterial regulatory helix-turn-helix protein, lysR family8-6582.21.7e-23

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_053136541.1 LysR family transcriptional regulator [Streptomyces ambofaci... 14210.0e+00
WP_109033244.1 LysR family transcriptional regulator [Streptomyces rubrogri... 12906.2e-178
WP_193486378.1 LysR family transcriptional regulator [Streptomyces anthocya... 12906.8e-178
WP_011030054.1 MULTISPECIES: LysR family transcriptional regulator [Strepto... 12872.1e-177
EFD66953.1 LysR-family transcriptional regulatory protein [Streptomyces livi... 12863.1e-177
WP_016327190.1 MULTISPECIES: LysR family transcriptional regulator [Strepto... 12863.2e-177
WP_136208088.1 LysR family transcriptional regulator [Streptomyces sp. LRa1... 12854.2e-177
WP_030869542.1 MULTISPECIES: LysR family transcriptional regulator [Strepto... 12854.6e-177
CAB51135.1 transcriptional regulator of LysR family [Streptomyces coelicolo... 12811.3e-176
CAB51139.1 transcriptional regulator of LysR family [Streptomyces lividans] 12802.1e-176

PSORT result

LocalizationCertaintyPSORT said
Not Clear