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IDSAM23877_5006 TypeCDS
From5307409 nt length1338
To5308746 aa length445
Gene pI9.90
DefinitionIntegral membrane protein M.W (Da) 47250
Note AseI frg.
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_3036 putative secreted protein5730.0e+00
coelSCO5218 putative integral membrane protein7190.0e+00

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2);

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

HD1HD domain247-36773.21.8e-20

HD_51HD domain296-35768.15.4e-19

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_053136863.1 HD domain-containing protein [Streptomyces ambofaciens] >gb 15360.0e+00
WP_063483043.1 HD domain-containing protein [Streptomyces ambofaciens] >gb 15330.0e+00
WP_121749132.1 HD-GYP domain-containing protein [Streptomyces sp. E2N166] 13560.0e+00
WP_055417934.1 HD-GYP domain-containing protein [Streptomyces pactum] >gb 13450.0e+00
WP_210960549.1 HD-GYP domain-containing protein [Streptomyces sp. b94] >lcl... 13361.7e-180
WP_219182373.1 HD domain-containing protein [Streptomyces sp. AC542_RSS864] 13352.3e-180
WP_136236148.1 HD-GYP domain-containing protein [Streptomyces sp. SS52] >gb... 13352.6e-180
WP_216882671.1 MULTISPECIES: HD domain-containing protein [unclassified Str... 13343.9e-180
WP_100045885.1 HD-GYP domain-containing protein [Streptomyces sp. Alain-F2R... 13334.8e-180
WP_164287438.1 HD-GYP domain-containing protein, partial [Streptomyces roch... 13314.9e-180

PSORT result

LocalizationCertaintyPSORT said
Not Clear