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IDSAM23877_5101 TypeCDS
From5408317 nt length2100
To5410416 aa length699
Generho pI9.51
DefinitionTranscription termination factor Rho M.W (Da) 75793
Note AseI frg.
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_2915 putative transcription termination factor Rho7800.0e+00
coelSCO5357 SCBAC5H2.26 rho transcription terminator factor (fragment)10300.0e+00
sgrSGR_2179 putative transcription termination factor Rho7460.0e+00

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

Rho_RNA_bind1Rho termination factor, RNA-binding domain326-400103.83e-30

ATP-synt_ab1ATP synthase alpha/beta family, nucleotide-binding domain431-63574.77.1e-21

Rho_N1Rho termination factor, N-terminal domain40-8046.72e-12

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_053137099.1 transcription termination factor Rho [Streptomyces ambofacie... 20650.0e+00
WP_217254546.1 transcription termination factor Rho [Streptomyces sp. AC602... 20640.0e+00
WP_121703477.1 transcription termination factor Rho [Streptomyces sp. E5N29... 20600.0e+00
WP_210974659.1 transcription termination factor Rho [Streptomyces sp. RM72]... 20600.0e+00
WP_076976346.1 transcription termination factor Rho [Streptomyces sp. M1013... 20600.0e+00
WP_210983929.1 transcription termination factor Rho [Streptomyces sp. RK76]... 20590.0e+00
WP_193486277.1 transcription termination factor Rho [Streptomyces anthocyan... 20580.0e+00
WP_059301450.1 transcription termination factor Rho [Streptomyces canus] 20580.0e+00
WP_217140170.1 transcription termination factor Rho [Streptomyces sp. AC627... 20510.0e+00
WP_219182476.1 transcription termination factor Rho [Streptomyces sp. AC542... 20510.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear