-- | --

IDSAM23877_5105 TypeCDS
From5413422 nt length1077
To5414498 aa length358
GeneprfA pI4.74
Definitionpeptide chain release factor RF-1 M.W (Da) 39442
NoteEvidence 2a : Function of homologous gene experimentally demonstrated in an other organism%3B PubMedId : 11118225%2C 2548996%2C 3049538%2C 3889910%2C 7543480%2C 7883187%3B Product type f : factor AseI frg.
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_2912 putative peptide chain release factor 16560.0e+00
coelSCO5360 prfA peptide chain release factor7250.0e+00
sgrSGR_2176 putative peptide chain release factor 16670.0e+00

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

PCRF1PCRF domain11-206228.36.2e-68

RF-11RF-1 domain214-323137.71.4e-40

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_053137105.1 peptide chain release factor 1 [Streptomyces ambofaciens] >g... 16370.0e+00
WP_115744227.1 peptide chain release factor 1 [Streptomyces sp. CB09001] >g... 16300.0e+00
WP_164419679.1 MULTISPECIES: peptide chain release factor 1 [Streptomyces] 16290.0e+00
WP_007387664.1 MULTISPECIES: peptide chain release factor 1 [Streptomyces] ... 16280.0e+00
WP_003973637.1 MULTISPECIES: peptide chain release factor 1 [Streptomyces] ... 16270.0e+00
WP_210983930.1 peptide chain release factor 1 [Streptomyces sp. RK76] >lcl 16250.0e+00
WP_030187239.1 peptide chain release factor 1 [Streptomyces violaceorubidus... 16250.0e+00
WP_059301454.1 MULTISPECIES: peptide chain release factor 1 [Streptomyces] ... 16220.0e+00
WP_121709189.1 peptide chain release factor 1 [Streptomyces sp. E5N91] 16210.0e+00
WP_189228643.1 peptide chain release factor 1 [Streptomyces flaveolus] >dbj... 16200.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear