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IDSAM23877_5139 TypeCDS
From5444411 nt length873
To5443539 aa length290
Gene pI6.24
DefinitionABC transporter integral membrane protein M.W (Da) 30372
Note AseI frg.
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_2863 putative ABC transporter permease protein3896.0e-138
coelSCO5392 putative ABC transporter integral membrane subunit4061.0e-144
sgrSGR_2145 putative ABC transporter permease protein2411.0e-79

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

ABC2_membrane_21ABC-2 family transporter protein96-29031.21.2e-07

ABC2_membrane_41ABC-2 family transporter protein42-21331.51.4e-07

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_053137180.1 ABC transporter permease subunit [Streptomyces ambofaciens] ... 9031.4e-119
WP_189291838.1 ABC transporter permease subunit [Streptomyces fumigatiscler... 7945.4e-103
WP_210960432.1 ABC transporter permease subunit [Streptomyces sp. b94] >lcl... 7754.0e-100
WP_189228616.1 ABC transporter permease subunit [Streptomyces flaveolus] >d... 7591.0e-97
WP_188185164.1 ABC transporter permease subunit [Streptomyces sp. TRM S81-3... 7581.4e-97
WP_217166558.1 ABC transporter permease subunit [Streptomyces sp. AC512_CC8... 7546.2e-97
WP_145867202.1 ABC transporter permease subunit [Streptomyces capillispiral... 7521.3e-96
WP_224335535.1 ABC transporter permease [Streptomyces olivaceus] >lcl 7484.1e-96
WP_190161642.1 ABC transporter permease subunit [Streptomyces malachitofusc... 7475.7e-96
WP_114255339.1 ABC transporter permease subunit [Streptomyces sp. Go-475] >... 7476.8e-96

PSORT result

LocalizationCertaintyPSORT said
Not Clear