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IDSAM23877_5299 TypeCDS
From5633346 nt length3966
To5629381 aa length1321
Gene pI8.14
Definitionputative membrane protein SC1C2.25c M.W (Da) 138803
NoteEvidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology AseI frg.
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_2694 putative sensor-like histidine kinase11550.0e+00
coelSCO5544 hypothetical protein13260.0e+00

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2);

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

NIT1Nitrate and nitrite sensing133-383148.63.4e-43

HAMP1HAMP domain402-48770.49.9e-20

HATPase_c1Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase606-71243.83e-11

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_063483175.1 sensor histidine kinase [Streptomyces ambofaciens] >gb 31240.0e+00
WP_053137552.1 sensor histidine kinase [Streptomyces ambofaciens] >gb 31240.0e+00
WP_153182717.1 nitrate- and nitrite sensing domain-containing protein, part... 30540.0e+00
WP_226486839.1 nitrate- and nitrite sensing domain-containing protein [Stre... 30340.0e+00
MZD53010.1 HAMP domain-containing protein [Streptomyces sp. SID5606] 30340.0e+00
WP_064730000.1 nitrate- and nitrite sensing domain-containing protein [Stre... 30340.0e+00
WP_202544509.1 nitrate- and nitrite sensing domain-containing protein, part... 30280.0e+00
MZE67944.1 HAMP domain-containing protein [Streptomyces sp. SID5789] 30250.0e+00
WP_202557457.1 nitrate- and nitrite sensing domain-containing protein, part... 30220.0e+00
WP_210960263.1 nitrate- and nitrite sensing domain-containing protein [Stre... 30170.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear