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IDSAM23877_5309 TypeCDS
From5641773 nt length660
To5642432 aa length219
Genehup pI11.89
DefinitionDNA-binding protein HU 2 M.W (Da) 22429
Note AseI frg.
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_2684 putative histone-like DNA-binding protein2135.0e-71
coelSCO5556 histone-like DNA binding protein2431.0e-82
sgrSGR_1926 putative histone-like DNA-binding protein2287.0e-77

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

Bac_DNA_binding1Bacterial DNA-binding protein1-8881.92.7e-23

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_219184752.1 HU family DNA-binding protein [Streptomyces sp. AC542_RSS864... 4341.0e-50
WP_030971557.1 MULTISPECIES: HU family DNA-binding protein [Streptomyces] >... 4341.0e-50
WP_100049799.1 HU family DNA-binding protein [Streptomyces sp. Alain-F2R5] ... 4341.0e-50
WP_189233035.1 HU family DNA-binding protein [Streptomyces flaveolus] >dbj 4341.1e-50
WP_225638674.1 MULTISPECIES: HU family DNA-binding protein [unclassified St... 4341.1e-50
WP_053137583.1 HU family DNA-binding protein [Streptomyces ambofaciens] >gb... 4341.1e-50
MYR44398.1 DNA-binding protein [Streptomyces sp. SID5910] 4341.1e-50
WP_019328739.1 MULTISPECIES: HU family DNA-binding protein [Streptomyces] >... 4341.1e-50
WP_046250955.1 MULTISPECIES: HU family DNA-binding protein [Streptomyces] >... 4341.1e-50
WP_127439817.1 HU family DNA-binding protein [Streptomyces sp. WAC04189] >g... 4341.1e-50

PSORT result

LocalizationCertaintyPSORT said
Not Clear