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IDSAM23877_5327 TypeCDS
From5659552 nt length405
To5659148 aa length134
GeneytfH pI6.27
Definitionputative transcriptional regulator M.W (Da) 15166
NoteEvidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B PubMedId : 20088838%3B Product type pr : putative regulator AseI frg.
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_2662 putative transcriptional regulator1981.0e-67
coelSCO5574 hypothetical protein2504.0e-88
sgrSGR_1906 putative transcriptional regulator1972.0e-67

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

HxlR1HxlR-like helix-turn-helix31-11384.92.3e-24

PadR1Transcriptional regulator PadR-like family53-10325.68e-06

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_053137637.1 helix-turn-helix transcriptional regulator [Streptomyces amb... 6931.1e-92
WP_063483186.1 helix-turn-helix transcriptional regulator [Streptomyces amb... 6887.6e-92
WP_164245487.1 helix-turn-helix transcriptional regulator [Streptomyces coe... 6522.5e-86
WP_194279907.1 helix-turn-helix transcriptional regulator [Streptomyces sp.... 6513.3e-86
QFX86119.1 transcriptional regulator [Streptomyces sp. SYP-A7193] 6505.0e-86
WP_007444869.1 MULTISPECIES: helix-turn-helix transcriptional regulator [St... 6488.5e-86
MZE42465.1 transcriptional regulator [Streptomyces sp. SID5477] >gb 6481.0e-85
WP_189749166.1 helix-turn-helix transcriptional regulator [Streptomyces ten... 6471.3e-85
AZM75288.1 transcriptional regulator [Streptomyces sp. KPB2] 6453.2e-85
WP_061442352.1 MULTISPECIES: helix-turn-helix transcriptional regulator [St... 6443.2e-85

PSORT result

LocalizationCertaintyPSORT said
Not Clear