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IDSAM23877_5332 TypeCDS
From5662838 nt length3555
To5666392 aa length1184
Genesmc pI5.14
DefinitionChromosome partition protein Smc M.W (Da) 128915
Note AseI frg.
SignalP v.4.0Signal peptide | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_2658 putative chromosome segregation protein17840.0e+00
coelSCO5577 putative chromosome associated protein19110.0e+00
sgrSGR_1901 putative chromosome segregation protein16660.0e+00

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

SMC_N1RecF/RecN/SMC N terminal domain3-1176240.21.5e-71

SMC_hinge1SMC proteins Flexible Hinge Domain512-62282.42.7e-23

AAA_212AAA domain, putative AbiEii toxin, Type IV TA system26-83, 1090-115563.72.2e-17

AAA_231AAA domain6-25749.37.4e-13

AAA_151AAA ATPase domain1-4948.68.1e-13

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_053137651.1 chromosome segregation protein SMC [Streptomyces ambofaciens... 38150.0e+00
WP_063483188.1 chromosome segregation protein SMC [Streptomyces ambofaciens... 37990.0e+00
MZE70408.1 chromosome segregation protein SMC [Streptomyces sp. SID5789] 36530.0e+00
WP_189749165.1 chromosome segregation protein SMC [Streptomyces tendae] >db... 36470.0e+00
WP_121749381.1 chromosome segregation protein SMC [Streptomyces sp. E2N166] 36370.0e+00
WP_164414414.1 chromosome segregation protein SMC [Streptomyces coelicoflav... 36360.0e+00
WP_087807029.1 chromosome segregation protein SMC [Streptomyces sp. CS113] ... 36350.0e+00
WP_125628645.1 chromosome segregation protein SMC [Streptomyces sp. KPB2] >... 36340.0e+00
WP_202558016.1 chromosome segregation protein SMC [Streptomyces sp. SID5789... 36340.0e+00
WP_212731320.1 chromosome segregation protein SMC [Streptomyces sp. V17-9] ... 36280.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear