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IDSAM23877_5393 TypeCDS
From5728983 nt length1248
To5730230 aa length415
Gene pI4.82
DefinitionPutrescine ABC transporter putrescine-binding protein PotF M.W (Da) 45672
Note AseI frg.
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_2591 putative polyamine ABC transporter substrate-binding protein7060.0e+00
coelSCO5667 putative ABC-transporter polyamine-binding lipop rotein7160.0e+00
sgrSGR_1837 putative polyamine ABC transporter substrate-binding protein6510.0e+00

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

SBP_bac_81Bacterial extracellular solute-binding protein99-374103.22e-29

SBP_bac_61Bacterial extracellular solute-binding protein138-37581.65.2e-23

SBP_bac_11Bacterial extracellular solute-binding protein99-34859.64.5e-16

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_053137819.1 spermidine/putrescine ABC transporter substrate-binding prot... 20300.0e+00
19220.0e+00
WP_019328903.1 MULTISPECIES: spermidine/putrescine ABC transporter substrat... 19210.0e+00
WP_175462566.1 spermidine/putrescine ABC transporter substrate-binding prot... 19200.0e+00
WP_210953537.1 spermidine/putrescine ABC transporter substrate-binding prot... 19190.0e+00
WP_127434262.1 spermidine/putrescine ABC transporter substrate-binding prot... 19180.0e+00
WP_219184811.1 extracellular solute-binding protein [Streptomyces sp. AC542... 19050.0e+00
WP_100044587.1 spermidine/putrescine ABC transporter substrate-binding prot... 19030.0e+00
WP_225635632.1 MULTISPECIES: spermidine/putrescine ABC transporter substrat... 19030.0e+00
PAK27334.1 ABC transporter substrate-binding protein [Streptomyces sp. alain... 19030.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear