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IDSAM23877_5395 TypeCDS
From5731417 nt length930
To5732346 aa length309
Gene pI9.52
DefinitionPolyamine ABC-transporter integral membrane protein M.W (Da) 34100
Note AseI frg.
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_2589 putative polyamine ABC transporter permease protein5170.0e+00
coelSCO5669 putative polyamine ABC-transporter integral memb rane protein5780.0e+00
sgrSGR_1835 putative polyamine ABC transporter permease protein5050.0e+00

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

BPD_transp_11Binding-protein-dependent transport system inner membrane component103-29542.07.3e-11

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_053137826.1 ABC transporter permease [Streptomyces ambofaciens] >gb 13710.0e+00
WP_189233101.1 MULTISPECIES: ABC transporter permease [Streptomyces] 13660.0e+00
PAK27335.1 ABC transporter permease [Streptomyces sp. alain-838] 13590.0e+00
WP_114529280.1 ABC transporter permease [Streptomyces parvulus] >gb 13580.0e+00
WP_153177722.1 ABC transporter permease [Streptomyces sp. SYP-A7193] >gb 13580.0e+00
WP_073731546.1 ABC transporter permease [Streptomyces sp. CB02414] >gb 13580.0e+00
OSC72626.1 ABC transporter permease [Streptomyces sp. 4F] 13580.0e+00
WP_100044588.1 ABC transporter permease [Streptomyces sp. Alain-F2R5] >gb 13560.0e+00
WP_210960369.1 ABC transporter permease [Streptomyces sp. b94] >lcl 13560.0e+00
WP_109035993.1 ABC transporter permease [Streptomyces rubrogriseus] >gb 13560.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear