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IDSAM23877_5417 TypeCDS
From5764858 nt length1158
To5766015 aa length385
GeneispG pI5.18
Definition4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 2 M.W (Da) 40742
Note AseI frg.
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_2561 putative 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase7580.0e+00
coelSCO5696 putative 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase7670.0e+00
sgrSGR_1821 putative 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase7070.0e+00

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

GcpE1GcpE protein22-361450.92.6e-135

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_053137892.1 flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphos... 19100.0e+00
WP_063483234.1 flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphos... 19070.0e+00
WP_133889406.1 flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphos... 18980.0e+00
WP_073731521.1 MULTISPECIES: flavodoxin-dependent (E)-4-hydroxy-3-methylbut... 18940.0e+00
WP_046249503.1 MULTISPECIES: flavodoxin-dependent (E)-4-hydroxy-3-methylbut... 18900.0e+00
WP_125495191.1 flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphos... 18880.0e+00
WP_153177700.1 MULTISPECIES: flavodoxin-dependent (E)-4-hydroxy-3-methylbut... 18860.0e+00
WP_053637720.1 MULTISPECIES: flavodoxin-dependent (E)-4-hydroxy-3-methylbut... 18850.0e+00
WP_064730103.1 flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphos... 18840.0e+00
WP_199578762.1 flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphos... 18830.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear