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IDSAM23877_5424 TypeCDS
From5772528 nt length537
To5773064 aa length178
GenerimP pI4.47
DefinitionRibosome maturation factor RimP M.W (Da) 19666
Note AseI frg.
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_2554 hypothetical protein2734.0e-96
coelSCO5703 hypothetical protein3002.0e-106
sgrSGR_1814 conserved hypothetical protein2199.0e-75

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

DUF1501Putative ribosome maturation factor RimP12-151119.67.8e-35

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_053137913.1 ribosome maturation factor RimP [Streptomyces ambofaciens] >... 8921.4e-121
WP_210963922.1 ribosome maturation factor RimP [Streptomyces sp. b94] >lcl 8201.4e-110
WP_043379264.1 ribosome maturation factor RimP [Streptomyces mutabilis] >gb... 8151.0e-109
WP_121749461.1 ribosome maturation factor RimP [Streptomyces sp. E2N166] 8131.7e-109
WP_191889168.1 ribosome maturation factor RimP [Streptomyces mutabilis] >db... 8141.7e-109
WP_161168124.1 ribosome maturation factor RimP [Streptomyces sp. SID5910] >... 8061.9e-108
WP_100047830.1 ribosome maturation factor RimP [Streptomyces sp. Alain-F2R5... 8062.7e-108
PAK22112.1 ribosome maturation factor RimP [Streptomyces sp. alain-838] 8035.9e-108
WP_019330970.1 MULTISPECIES: ribosome maturation factor RimP [Streptomyces]... 8003.2e-107
WP_127440955.1 MULTISPECIES: ribosome maturation factor RimP [Streptomyces]... 7994.0e-107

PSORT result

LocalizationCertaintyPSORT said
Not Clear