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IDSAM23877_5455 TypeCDS
From5821485 nt length864
To5822348 aa length287
Gene pI4.57
Definitionputative membrane protein M.W (Da) 30141
NoteEvidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology AseI frg.
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_2509 putative membrane protein3894.0e-138
coelSCO5751 hypothetical protein4491.0e-161
sgrSGR_1770 conserved hypothetical protein3641.0e-128

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

HTH_251Helix-turn-helix domain36-9671.92.6e-20

DUF41151Domain of unknown function (DUF4115)208-27861.56e-17

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_053137987.1 helix-turn-helix domain-containing protein [Streptomyces amb... 11633.2e-159
WP_063483246.1 helix-turn-helix domain-containing protein [Streptomyces amb... 11539.6e-158
WP_108990700.1 helix-turn-helix domain-containing protein [Streptomyces coe... 10696.8e-145
NEB12652.1 DUF4115 domain-containing protein [Streptomyces coelicoflavus] 10681.1e-144
WP_153177658.1 MULTISPECIES: helix-turn-helix domain-containing protein [un... 10662.1e-144
WP_127895465.1 MULTISPECIES: helix-turn-helix domain-containing protein [St... 10634.7e-144
NDZ73715.1 DUF4115 domain-containing protein [Streptomyces sp. SID10362] 10635.5e-144
WP_164411803.1 helix-turn-helix domain-containing protein [Streptomyces coe... 10626.4e-144
WP_226030035.1 DUF4115 domain-containing protein [Streptomyces hyderabadens... 10627.6e-144
WP_125628550.1 MULTISPECIES: helix-turn-helix domain-containing protein [un... 10628.4e-144

PSORT result

LocalizationCertaintyPSORT said
Not Clear