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IDSAM23877_5497 TypeCDS
From5862289 nt length2172
To5864460 aa length723
Gene pI6.44
Definitionputative ppGpp synthetase/hydrolase M.W (Da) 78453
NoteEvidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology AseI frg.
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_2472 putative RelA homolog11590.0e+00
coelSCO5794 putative kinase/phosphohydrolase12480.0e+00
sgrSGR_1726 putative ppGpp synthetase/hydrolase9930.0e+00

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

HD_41HD domain80-227134.03.2e-39

TGS1TGS domain446-50454.01.2e-14

RelA_SpoT1Region found in RelA / SpoT proteins315-38353.42.5e-14

ACT_41ACT domain642-71536.64.7e-09

HD1HD domain99-19632.19.9e-08

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_053142874.1 HD domain-containing protein [Streptomyces ambofaciens] >gb 33010.0e+00
WP_063484553.1 HD domain-containing protein [Streptomyces ambofaciens] >gb 32890.0e+00
WP_210962789.1 HD domain-containing protein [Streptomyces sp. b94] >lcl 30530.0e+00
WP_121749613.1 HD domain-containing protein [Streptomyces sp. E2N166] 30520.0e+00
WP_219184126.1 HD domain-containing protein [Streptomyces sp. AC542_RSS864] 30240.0e+00
WP_217246321.1 HD domain-containing protein [Streptomyces sp. AC602_WCS936] 30200.0e+00
WP_191887743.1 HD domain-containing protein [Streptomyces mutabilis] >dbj 29920.0e+00
WP_055419996.1 HD domain-containing protein [Streptomyces pactum] >gb 29910.0e+00
WP_109204379.1 MULTISPECIES: HD domain-containing protein [unclassified Str... 29870.0e+00
WP_210953092.1 HD domain-containing protein [Streptomyces sp. RT42] >lcl 29840.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear