-- | --

IDSAM23877_5746 TypeCDS
From6227748 nt length1206
To6226543 aa length401
Gene pI6.39
DefinitionRibonuclease D M.W (Da) 43146
Note AseI frg.
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_2231 putative ribonuclease D6790.0e+00
coelSCO6028 hypothetical protein7100.0e+00
sgrSGR_1476 putative ribonuclease D5350.0e+00

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

DNA_pol_A_exo113'-5' exonuclease20-182122.61.3e-35

HRDC1HRDC domain224-28151.18.6e-14

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
AKZ58791.1 Ribonuclease D [Streptomyces ambofaciens ATCC 23877] 16980.0e+00
WP_162492130.1 ribonuclease D [Streptomyces ambofaciens] 16940.0e+00
ANB09188.1 3'-5' exonuclease [Streptomyces ambofaciens] 16570.0e+00
WP_217146020.1 HRDC domain-containing protein [Streptomyces sp. AC627_RSS90... 16290.0e+00
WP_176603884.1 MULTISPECIES: ribonuclease D [Streptomyces] 16130.0e+00
WP_003972895.1 MULTISPECIES: ribonuclease D [Streptomyces] >gb 16110.0e+00
WP_175461928.1 ribonuclease D [Streptomyces sp. WAC04189] >gb 16100.0e+00
WP_168715225.1 MULTISPECIES: ribonuclease D [Streptomyces] >lcl 16100.0e+00
WP_202493790.1 MULTISPECIES: ribonuclease D [Streptomyces] 16090.0e+00
WP_199807719.1 ribonuclease D [Streptomyces sp. NRRL WC-3795] 16080.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear