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IDSAM23877_5797 TypeCDS
From6281079 nt length1116
To6282194 aa length371
Gene pI6.35
Definitionputative HTH-type transcriptional regulator CynR M.W (Da) 38542
NoteEvidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology AseI frg.
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_2153 putative LysR-family transcriptional regulator4628.0e-165
coelSCO2475 putative lysR-family transcriptional regulator1044.0e-26

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2);

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

LysR_substrate1LysR substrate binding domain87-290118.22.8e-34

HTH_11Bacterial regulatory helix-turn-helix protein, lysR family3-6279.61.1e-22

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
AKZ58842.1 putative HTH-type transcriptional regulator CynR [Streptomyces am... 12715.2e-173
ANB09250.1 LysR family transcriptional regulator [Streptomyces ambofaciens] 12529.2e-170
WP_079030476.1 LysR family transcriptional regulator [Streptomyces ambofaci... 12454.1e-169
WP_107429770.1 LysR family transcriptional regulator [Streptomyces sp. CB02... 11911.1e-161
WP_217247140.1 LysR family transcriptional regulator [Streptomyces sp. AC60... 11883.3e-161
WP_225631821.1 MULTISPECIES: LysR family transcriptional regulator [unclass... 11874.6e-161
WP_189869057.1 LysR family transcriptional regulator [Streptomyces viridivi... 11874.7e-161
GHB19927.1 LysR family transcriptional regulator [Streptomyces viridiviolac... 11861.1e-160
WP_189232178.1 LysR family transcriptional regulator [Streptomyces flaveolu... 11832.2e-160
WP_223180756.1 LysR family transcriptional regulator [Streptomyces sp. TRM ... 11799.3e-160

PSORT result

LocalizationCertaintyPSORT said
Not Clear