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IDSAM23877_5804 TypeCDS
From6291719 nt length948
To6292666 aa length315
Gene pI10.05
Definitionputative transport system integral membrane protein M.W (Da) 34180
NoteEvidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology AseI frg.
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_2145 putative ABC transporter permease protein4862.0e-175
coelSCO6086 putative transport system integral membrane protein5110.0e+00
sgrSGR_1415 putative ABC transporter permease protein4941.0e-178

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

BPD_transp_11Binding-protein-dependent transport system inner membrane component104-30188.25e-25

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_053138963.1 sugar ABC transporter permease [Streptomyces ambofaciens] >g... 13290.0e+00
WP_217142133.1 ABC transporter permease subunit [Streptomyces sp. AC627_RSS... 12422.7e-170
WP_210963014.1 sugar ABC transporter permease [Streptomyces sp. b94] >lcl 12273.4e-168
WP_055419618.1 sugar ABC transporter permease [Streptomyces pactum] >gb 12275.9e-168
WP_121749817.1 sugar ABC transporter permease [Streptomyces sp. E2N166] 12259.4e-168
PAK25487.1 transporter [Streptomyces sp. alain-838] 12241.1e-167
NEB08923.1 sugar ABC transporter permease [Streptomyces coelicoflavus] 12222.7e-167
WP_153177353.1 sugar ABC transporter permease [Streptomyces sp. SYP-A7193] ... 12213.2e-167
WP_217167471.1 ABC transporter permease subunit [Streptomyces sp. AC512_CC8... 12171.6e-166
WP_203721497.1 sugar ABC transporter permease [Streptomyces coelicoflavus] 12153.4e-166

PSORT result

LocalizationCertaintyPSORT said
Not Clear