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IDSAM23877_5831 TypeCDS
From6319968 nt length690
To6320657 aa length229
Gene pI10.99
Definitionputative HTH-type transcriptional regulator in mcrB 3'region M.W (Da) 24134
Note AseI frg.
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_2119 putative AraC-family transcriptional regulator2992.0e-104
coelSCO6119 putative AraC family transcriptional regulator3158.0e-111
sgrSGR_1386 putative AraC-family transcriptional regulator2199.0e-73

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

HTH_181Helix-turn-helix domain150-22663.71.3e-17

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_053139015.1 helix-turn-helix transcriptional regulator [Streptomyces amb... 9189.1e-124
WP_225637372.1 MULTISPECIES: helix-turn-helix transcriptional regulator [un... 8371.9e-111
KPC87800.1 AraC family transcriptional regulator [Streptomyces sp. NRRL WC-3... 8362.8e-111
WP_121749839.1 helix-turn-helix transcriptional regulator [Streptomyces sp.... 8344.9e-111
WP_055419596.1 helix-turn-helix transcriptional regulator [Streptomyces pac... 8336.7e-111
WP_087789140.1 helix-turn-helix transcriptional regulator [Streptomyces sp.... 8329.6e-111
WP_007445419.1 helix-turn-helix transcriptional regulator [Streptomyces coe... 8321.1e-110
WP_189232148.1 helix-turn-helix transcriptional regulator [Streptomyces fla... 8301.9e-110
WP_210963034.1 helix-turn-helix transcriptional regulator [Streptomyces sp.... 8302.4e-110
WP_108987652.1 helix-turn-helix transcriptional regulator [Streptomyces coe... 8274.7e-110

PSORT result

LocalizationCertaintyPSORT said
Not Clear