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IDSAM23877_5864 TypeCDS
From6349502 nt length1113
To6350614 aa length370
GenersgA pI5.95
Definitionputative ribosome biogenesis GTPase RsgA M.W (Da) 39346
NoteEvidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology AseI frg.
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_2086 putative ribosome-associated GTPase5930.0e+00
coelSCO6149 putative integral membrane nucleotide binding protein6370.0e+00
sgrSGR_1369 conserved hypothetical protein5410.0e+00

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

DUF2581Protein of unknown function, DUF25897-273155.51e-45

MMR_HSR1150S ribosome-binding GTPase208-28831.21.7e-07

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_053139069.1 ribosome small subunit-dependent GTPase A [Streptomyces ambo... 17360.0e+00
WP_121749862.1 ribosome small subunit-dependent GTPase A [Streptomyces sp. ... 16440.0e+00
WP_210963054.1 ribosome small subunit-dependent GTPase A [Streptomyces sp. ... 16330.0e+00
WP_019326090.1 MULTISPECIES: ribosome small subunit-dependent GTPase A [Str... 16140.0e+00
WP_127441437.1 MULTISPECIES: ribosome small subunit-dependent GTPase A [Str... 16130.0e+00
WP_216882867.1 MULTISPECIES: ribosome small subunit-dependent GTPase A [unc... 16120.0e+00
WP_031021175.1 MULTISPECIES: ribosome small subunit-dependent GTPase A [Str... 16120.0e+00
WP_193515486.1 ribosome small subunit-dependent GTPase A [Streptomyces vina... 16120.0e+00
WP_127440894.1 ribosome small subunit-dependent GTPase A [Streptomyces sp. ... 16120.0e+00
WP_100048673.1 ribosome small subunit-dependent GTPase A [Streptomyces sp. ... 16110.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear