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IDSAM23877_5948 TypeCDS
From6443015 nt length369
To6443383 aa length122
Gene pI4.76
Definitionputative DNA-binding protein M.W (Da) 13192
NoteEvidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology AseI frg.
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_2021 putative DNA-binding protein2166.0e-75
coelSCO6208 hypothetical protein2215.0e-77
sgrSGR_1312 conserved hypothetical protein1868.0e-63

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

HTH_221HTH domain56-11772.42.2e-20

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_053139193.1 helix-turn-helix domain-containing protein [Streptomyces amb... 6215.5e-82
WP_226485359.1 helix-turn-helix domain-containing protein [Streptomyces par... 6006.9e-79
WP_064730493.1 helix-turn-helix domain-containing protein [Streptomyces par... 5953.9e-78
WP_114529921.1 helix-turn-helix domain-containing protein [Streptomyces par... 5954.5e-78
MZD53336.1 transcriptional regulator [Streptomyces sp. SID5606] 5947.0e-78
MYR47326.1 transcriptional regulator [Streptomyces sp. SID5910] 5921.3e-77
WP_044385316.1 helix-turn-helix domain-containing protein [Streptomyces cya... 5921.4e-77
WP_048574346.1 helix-turn-helix domain-containing protein [Streptomyces lee... 5893.3e-77
WP_019330150.1 MULTISPECIES: helix-turn-helix domain-containing protein [un... 5885.0e-77
WP_122618798.1 MULTISPECIES: helix-turn-helix domain-containing protein [un... 5876.9e-77

PSORT result

LocalizationCertaintyPSORT said
Not Clear