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IDSAM23877_5973 TypeCDS
From6469754 nt length765
To6468990 aa length254
GenebdcA pI5.67
DefinitionCyclic-di-GMP-binding biofilm dispersal mediator protein M.W (Da) 25217
Note AseI frg.
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
coelSCO6249 putative dehydrogenase/reductase4093.0e-147
sgrSGR_1285 putative short-chain dehydrogenase2711.0e-92

*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

adh_short_C21Enoyl-(Acyl carrier protein) reductase25-251190.23.6e-56

adh_short1short chain dehydrogenase18-203167.42.3e-49

KR1KR domain18-16737.22.4e-09

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_053139241.1 SDR family oxidoreductase [Streptomyces ambofaciens] >gb 8917.5e-119
WP_122618827.1 3-oxoacyl-ACP reductase FabG [Streptomyces sp. Tu 4128] 8613.7e-114
WP_125493625.1 3-oxoacyl-ACP reductase FabG [Streptomyces sp. WAC 04229] >g... 8466.6e-112
OKI81256.1 oxidoreductase [Streptomyces sp. CB02414] 8343.5e-110
WP_198941460.1 SDR family oxidoreductase [Streptomyces sp. CB02414] 8334.7e-110
WP_087789025.1 MULTISPECIES: SDR family oxidoreductase [Streptomyces] >gb 8311.2e-109
WP_164143560.1 SDR family oxidoreductase [Streptomyces coelicoflavus] >gb 8241.4e-108
WP_007388129.1 MULTISPECIES: SDR family oxidoreductase [Streptomyces] >gb 8241.4e-108
WP_165687172.1 SDR family oxidoreductase [Streptomyces sp. KO7888] 8212.2e-108
WP_141307671.1 3-oxoacyl-ACP reductase FabG [Streptomyces spinoverrucosus] 8213.5e-108

PSORT result

LocalizationCertaintyPSORT said
Not Clear