-- | --

IDSAM23877_5985 TypeCDS
From6480008 nt length3078
To6483085 aa length1025
Gene pI6.14
Definitionputative helicase M.W (Da) 108000
NoteEvidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology AseI frg.
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_1978 putative SNF2/RAD54 family helicase15130.0e+00
coelSCO6262 putative helicase16490.0e+00
sgrSGR_5543 putative SNF2/RAD54 family helicase13290.0e+00

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

SNF2_N1SNF2 family N-terminal domain579-834170.05.3e-50

DUF36701SNF2 Helicase protein388-516121.22.5e-35

Helicase_C1Helicase conserved C-terminal domain854-96558.47.4e-16

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_063796793.1 DEAD/DEAH box helicase [Streptomyces ambofaciens] >gb 41730.0e+00
WP_063483523.1 DEAD/DEAH box helicase [Streptomyces ambofaciens] 41500.0e+00
ANB09416.1 helicase [Streptomyces ambofaciens] 41090.0e+00
WP_210961635.1 DEAD/DEAH box helicase [Streptomyces sp. b94] >lcl 37220.0e+00
WP_226485382.1 ATP-dependent helicase [Streptomyces parvulus] 36830.0e+00
WP_114529955.1 DEAD/DEAH box helicase [Streptomyces parvulus] >gb 36810.0e+00
WP_053638085.1 DEAD/DEAH box helicase [Streptomyces sp. NRRL F-4707] >gb 36690.0e+00
WP_064730531.1 DEAD/DEAH box helicase [Streptomyces parvulus] >gb 36670.0e+00
WP_159327576.1 DEAD/DEAH box helicase [Streptomyces tendae] 36620.0e+00
WP_164457138.1 DEAD/DEAH box helicase [Streptomyces tendae] >gb 36600.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear