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IDSAM23877_6329 TypeCDS
From6819369 nt length627
To6818743 aa length208
Gene pI6.37
DefinitionDNA-binding protein M.W (Da) 22833
Note AseI frg.
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_1742 putative transcriptional regulator3481.0e-124
coelSCO6675 hypothetical protein3612.0e-129

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2);

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

HTH_31Helix-turn-helix78-12542.44.7e-11

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
AKZ59374.1 DNA-binding protein [Streptomyces ambofaciens ATCC 23877] 9354.9e-127
WP_053139826.1 helix-turn-helix domain-containing protein [Streptomyces amb... 9349.4e-127
WP_202483204.1 MULTISPECIES: helix-turn-helix domain-containing protein [St... 9102.7e-123
WP_007387293.1 helix-turn-helix transcriptional regulator [Streptomyces coe... 9095.4e-123
WP_184826567.1 MULTISPECIES: helix-turn-helix domain-containing protein [St... 8844.0e-119
WP_221500464.1 helix-turn-helix domain-containing protein [Streptomyces gri... 8844.3e-119
PZT70991.1 transcriptional regulator [Streptomyces sp. SW4] 8835.8e-119
WP_121750158.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 8801.4e-118
WP_055494092.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 8801.6e-118
WP_217142369.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 8783.4e-118

PSORT result

LocalizationCertaintyPSORT said
Not Clear