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IDSAM23877_6393 TypeCDS
From6896742 nt length2367
To6894376 aa length788
GeneyhgF pI6.35
Definitiontranscriptional accessory protein M.W (Da) 85624
NoteEvidence 2b : Function of strongly homologous gene%3B PubMedId : 8755871%3B Product type f : factor AseI frg.
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_1669 putative transcription accessory protein13720.0e+00
coelSCO6743 putative transcriptional accessory protein13720.0e+00
sgrSGR_984 putative transcription accessory protein12440.0e+00

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

Tex_N1Tex-like protein N-terminal domain19-202222.91.9e-66

Tex_YqgF1Tex protein YqgF-like domain334-459173.81.6e-51

HHH_31Helix-hairpin-helix motif499-56399.67.7e-29

S11S1 RNA binding domain658-72865.73.2e-18

HHH_71Helix-hairpin-helix motif472-56431.71.4e-07

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_053139939.1 RNA-binding transcriptional accessory protein [Streptomyces ... 32350.0e+00
WP_210961014.1 RNA-binding transcriptional accessory protein [Streptomyces ... 31540.0e+00
PAK26530.1 RNA-binding transcriptional accessory protein [Streptomyces sp. a... 31470.0e+00
WP_193776627.1 RNA-binding transcriptional accessory protein [Streptomyces ... 31470.0e+00
WP_100045558.1 RNA-binding transcriptional accessory protein [Streptomyces ... 31460.0e+00
WP_055419153.1 RNA-binding transcriptional accessory protein [Streptomyces ... 31440.0e+00
WP_191889058.1 RNA-binding transcriptional accessory protein [Streptomyces ... 31420.0e+00
WP_043377603.1 RNA-binding transcriptional accessory protein [Streptomyces ... 31360.0e+00
WP_219187826.1 helix-hairpin-helix domain-containing protein [Streptomyces ... 31340.0e+00
WP_210901145.1 RNA-binding transcriptional accessory protein [Streptomyces ... 31310.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear