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IDSAM23877_6420 TypeCDS
From6924187 nt length639
To6924825 aa length212
Gene pI7.03
DefinitionDNA-binding protein M.W (Da) 22474
Note AseI frg.
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_1644 putative regulatory protein3003.0e-105
coelSCO6770 putative DNA-binding protein3303.0e-117
sgrSGR_958 putative transcriptional regulator2593.0e-89

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

HTH_311Helix-turn-helix domain17-7560.01.9e-16

HTH_31Helix-turn-helix21-7551.28.4e-14

Cupin_21Cupin domain116-18450.61.1e-13

HTH_191Helix-turn-helix domain21-7638.11.1e-09

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_053139986.1 helix-turn-helix domain-containing protein [Streptomyces amb... 8236.4e-110
WP_063483682.1 helix-turn-helix domain-containing protein [Streptomyces amb... 8192.6e-109
WP_225635519.1 MULTISPECIES: XRE family transcriptional regulator [unclassi... 6997.0e-91
WP_073728157.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 6978.9e-91
WP_217253657.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 6981.1e-90
WP_191888514.1 helix-turn-helix domain-containing protein [Streptomyces mut... 6971.3e-90
WP_043377560.1 helix-turn-helix domain-containing protein [Streptomyces mut... 6961.6e-90
KFG72528.1 XRE family transcriptional regulator [Streptomyces mutabilis] 6952.3e-90
WP_161166009.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 6952.9e-90
WP_189231613.1 helix-turn-helix domain-containing protein [Streptomyces fla... 6943.8e-90

PSORT result

LocalizationCertaintyPSORT said
Not Clear